PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID EcC028212.10
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Myrtaceae; Myrtoideae; Eucalypteae; Eucalyptus
Family bHLH
Protein Properties Length: 249aa    MW: 27564.8 Da    PI: 6.1489
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
EcC028212.10genomeECGDView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH36.77.8e-1264137354
                   HHHHHHHHHHHHHHHHHHHHHHCTSCCC.........................TTS-STCHHHHHHHHHHHHHH CS
           HLH   3 rahnerErrRRdriNsafeeLrellPkas......................kapskKlsKaeiLekAveYIksL 54 
                   ++h+e+ErrRR+riN  +++Lr l+P+a                       + p   ++Ka+ L ++v+++++L
  EcC028212.10  64 KNHSEAERRRRARINAHLDTLRGLVPEAKksvalycqcccnlrfmgmlaklQIPMSQMDKAALLAEVVNHLRKL 137
                   58*************************888********************9999999**************998 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF474593.93E-1156144IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PROSITE profilePS5088814.22761137IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PfamPF000108.8E-1064137IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene3DG3DSA:4.10.280.104.4E-1365161IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SMARTSM003537.2E-967143IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene3DG3DSA:3.30.70.2601.7E-6177223No hitNo description
SuperFamilySSF550218.65E-5177224No hitNo description
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 249 aa     Download sequence    Send to blast
MGDSDFEVLS DDPRVEPGIR ALQRNGSSSY SSLVLDSERG ELVEASVSAK RKAPPAERNV  60
DALKNHSEAE RRRRARINAH LDTLRGLVPE AKKSVALYCQ CCCNLRFMGM LAKLQIPMSQ  120
MDKAALLAEV VNHLRKLKGN AEEAMRQYVI PTDADEIKVE QEQGEVVDLE FETIKASLCC  180
DYRPGLLSNL RRVLVDLGLI VLSAEVATLE GRMKSIMELT SHVGDKTLCQ VLSSSLRLAL  240
CSMVDQFST
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_010035845.11e-141PREDICTED: transcription factor bHLH30-like
RefseqXP_010035846.11e-141PREDICTED: transcription factor bHLH30-like
TrEMBLA0A059A0U61e-141A0A059A0U6_EUCGR; Uncharacterized protein
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G40200.18e-18bHLH family protein